Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TXNL4BThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)    
Predicted Functional Partners:
PRPF6
Pre-mRNA processing factor 6.
    
 0.946
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
 0.946
ZMAT2
Zinc finger matrin-type 2.
   
 0.937
PRPF8
Pre-mRNA processing factor 8.
    
 0.933
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 0.928
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 0.924
CCDC84
Coiled-coil domain containing 84.
    
 
 0.906
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
  0.904
DDX23
DEAD-box helicase 23; Belongs to the DEAD box helicase family.
    
 0.896
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.889
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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