Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
U3I5C9_ANAPPUncharacterized protein. (254 aa)    
Predicted Functional Partners:
CD44
CD44 molecule (Indian blood group).
   
 0.981
ITGA9
Integrin subunit alpha 9; Belongs to the integrin alpha chain family.
   
 0.978
ITGAV
Integrin subunit alpha V; Belongs to the integrin alpha chain family.
   
 0.975
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
    
 0.973
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.960
ITGA4
Integrin subunit alpha 4; Belongs to the integrin alpha chain family.
   
 0.959
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
    
 0.954
IRF7
Interferon regulatory factor 7.
    
 0.916
MMP7
Matrix metallopeptidase 7.
   
 0.887
ENSAPLP00000027063
Osteocalcin; Binds strongly to apatite and calcium.
      
 0.850
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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