STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3I5C9_ANAPPUncharacterized protein. (254 aa)    
Predicted Functional Partners:
CD44
CD44 molecule (Indian blood group).
   
 0.996
SPARC
Secreted protein acidic and cysteine rich.
      
 0.837
MMP13
Matrix metallopeptidase 13.
   
 
 0.731
ITGAV
Integrin subunit alpha V; Belongs to the integrin alpha chain family.
   
 0.715
MMP7
Matrix metallopeptidase 7.
     
 0.711
ITGA9
Integrin subunit alpha 9; Belongs to the integrin alpha chain family.
   
 0.698
RUNX1
Runt-related transcription factor.
     
 0.679
FN1
Fibronectin 1.
     
 0.673
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
    
 0.666
U3I5F9_ANAPP
Uncharacterized protein.
 
    
 0.642
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.