STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEIOCMeiosis specific with coiled-coil domain. (1001 aa)    
Predicted Functional Partners:
YTHDC2
YTH domain containing 2.
    
 
 0.648
XRN1
5'-3' exoribonuclease 1.
    
 
 0.625
YTHDC1
YTH domain containing 1.
    
 
 0.623
RBM46
RNA binding motif protein 46.
      
 0.621
YTHDF2
YTH N6-methyladenosine RNA binding protein 2.
      
 0.612
SPATA22
Spermatogenesis associated 22.
      
 0.611
MEIOB
Meiosis specific with OB-fold.
      
 0.611
HENMT1
HEN methyltransferase 1.
      
 0.611
YTHDF3
YTH N6-methyladenosine RNA binding protein 3.
      
 0.609
PLD6
Phospholipase D family member 6.
      
 0.602
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.