STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTA4HLeukotriene A(4) hydrolase; Belongs to the peptidase M1 family. (610 aa)    
Predicted Functional Partners:
LTC4S-2
Uncharacterized protein.
     
 0.955
LTC4S
Leukotriene C4 synthase.
     
 0.955
PTGR1
Prostaglandin reductase 1.
   
 
 0.952
ALOX5
Arachidonate 5-lipoxygenase.
     
 0.937
PTGR2
Uncharacterized protein.
   
 
 0.921
ZADH2
Zinc binding alcohol dehydrogenase domain containing 2.
     
  0.900
TRIT1
tRNA isopentenyltransferase 1; Belongs to the IPP transferase family.
 
    
 0.866
ALOX5AP
Arachidonate 5-lipoxygenase activating protein.
      
 0.698
XPNPEP3
X-prolyl aminopeptidase 3.
  
 
 0.662
PFKFB1
6PF2K domain-containing protein.
     
 0.604
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.