STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTA4HLeukotriene A(4) hydrolase; Belongs to the peptidase M1 family. (610 aa)    
Predicted Functional Partners:
LTC4S-2
Uncharacterized protein.
     
 0.958
LTC4S
Leukotriene C4 synthase.
     
 0.953
ALOX5
Arachidonate 5-lipoxygenase.
     
 0.920
TRIT1
tRNA isopentenyltransferase 1; Belongs to the IPP transferase family.
 
      0.861
TBXAS1
Thromboxane A synthase 1; Belongs to the cytochrome P450 family.
    
 0.635
PFKFB1
6PF2K domain-containing protein.
     
 0.633
PRKAB1
Protein kinase AMP-activated non-catalytic subunit beta 1.
      
 0.632
SUOX
Sulfite oxidase.
      
 0.608
MRPL13
Mitochondrial ribosomal protein L13.
 
 
 
 0.591
ALOX5AP
Arachidonate 5-lipoxygenase activating protein.
      
 0.542
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.