STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTOP1Otopetrin 1. (587 aa)    
Predicted Functional Partners:
TAS1R1
Taste 1 receptor member 1.
      
 0.611
DRD2
Dopamine receptor D2; Belongs to the G-protein coupled receptor 1 family.
 
    
 0.587
U3I9R4_ANAPP
Uncharacterized protein.
      
 0.556
NOX3
NADPH oxidase 3.
      
 0.542
TKFC
Triokinase and FMN cyclase.
      
 0.542
TMEM128
Transmembrane protein 128.
 
    
 0.505
CALHM1
Calcium homeostasis modulator 1.
   
  
 0.501
SLC30A4
Solute carrier family 30 member 4.
   
  
 0.486
OTOL1
Otolin 1.
      
 0.485
PLCB2
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
      
 0.479
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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