Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OTOP1Otopetrin 1. (587 aa)    
Predicted Functional Partners:
U3I9R4_ANAPP
Uncharacterized protein.
      
 0.726
TECTA
Tectorin alpha.
      
 0.626
CALHM1
Calcium homeostasis modulator 1.
   
  
 0.611
OTOL1
Otolin 1.
      
 0.611
TMEM128
Transmembrane protein 128.
 
    
 0.605
SPARC
Secreted protein acidic and cysteine rich.
      
 0.578
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
      
 0.548
RFTN2
Raftlin family member 2.
      
 0.546
PHTF2
Putative homeodomain transcription factor 2.
      
 0.545
ARMC9
Armadillo repeat containing 9.
      
 0.545
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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