Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RNF122Ring finger protein 122. (155 aa)    
Predicted Functional Partners:
MEX3C
Mex-3 RNA binding family member C.
   
  
 0.685
TXLNB
Taxilin beta.
      
 0.684
STUB1
STIP1 homology and U-box containing protein 1.
    
 0.621
CLRN3
Clarin 3.
      
 0.599
FBXL17
F-box and leucine rich repeat protein 17.
      
 0.572
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
    
 0.572
UBOX5
U-box domain containing 5.
    
 0.572
KCTD9
Potassium channel tetramerization domain containing 9.
      
 0.559
MARCHF5
Membrane associated ring-CH-type finger 5.
      
 0.546
UBXN7
UBX domain-containing protein 7.
   
 
 0.546
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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