STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP11Matrix metallopeptidase 11. (477 aa)    
Predicted Functional Partners:
FURIN
Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family.
    
 0.664
ENSAPLP00000020204
Uncharacterized protein.
    
 0.650
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.647
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.620
MMP7
Matrix metallopeptidase 7.
  
  
0.570
CDK11A
Protein kinase domain-containing protein.
      
 0.539
MMP1
Matrix metallopeptidase 1.
  
0.538
ENSAPLP00000032859
ZnMc domain-containing protein.
  
0.506
U3IGR3_ANAPP
ZnMc domain-containing protein.
  
0.466
U3I5C9_ANAPP
Uncharacterized protein.
     
 0.445
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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