POLRMT protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

POLRMT

DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1256 aa)

Predicted Functional Partners:

TFAM

0.985

DIMT1

0.977

TFB1M

0.969

SRFBP1

0.955

POLG

0.833

POLR1B

0.820

MTERF3

0.749

ACO2

0.702

POLG2

0.684

POLR2B

0.671

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACO2	POLRMT	ENSAPLP00000026786	ENSAPLP00000002536	Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.702
ACO2	TFAM	ENSAPLP00000026786	ENSAPLP00000031434	Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.	Transcription factor A, mitochondrial.	0.431
DIMT1	POLR1B	ENSAPLP00000009202	ENSAPLP00000003667	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.620
DIMT1	POLRMT	ENSAPLP00000009202	ENSAPLP00000002536	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.977
DIMT1	TFAM	ENSAPLP00000009202	ENSAPLP00000031434	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Transcription factor A, mitochondrial.	0.519
MTERF3	POLG2	ENSAPLP00000012549	ENSAPLP00000008732	Mitochondrial transcription termination factor 3.	DNA polymerase gamma 2, accessory subunit.	0.611
MTERF3	POLRMT	ENSAPLP00000012549	ENSAPLP00000002536	Mitochondrial transcription termination factor 3.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.749
MTERF3	TFAM	ENSAPLP00000012549	ENSAPLP00000031434	Mitochondrial transcription termination factor 3.	Transcription factor A, mitochondrial.	0.487
MTERF3	TFB1M	ENSAPLP00000012549	ENSAPLP00000005944	Mitochondrial transcription termination factor 3.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.515
POLG	POLG2	ENSAPLP00000031769	ENSAPLP00000008732	DNA polymerase gamma, catalytic subunit.	DNA polymerase gamma 2, accessory subunit.	0.956
POLG	POLRMT	ENSAPLP00000031769	ENSAPLP00000002536	DNA polymerase gamma, catalytic subunit.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.833
POLG	TFAM	ENSAPLP00000031769	ENSAPLP00000031434	DNA polymerase gamma, catalytic subunit.	Transcription factor A, mitochondrial.	0.640
POLG2	MTERF3	ENSAPLP00000008732	ENSAPLP00000012549	DNA polymerase gamma 2, accessory subunit.	Mitochondrial transcription termination factor 3.	0.611
POLG2	POLG	ENSAPLP00000008732	ENSAPLP00000031769	DNA polymerase gamma 2, accessory subunit.	DNA polymerase gamma, catalytic subunit.	0.956
POLG2	POLRMT	ENSAPLP00000008732	ENSAPLP00000002536	DNA polymerase gamma 2, accessory subunit.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.684
POLG2	TFAM	ENSAPLP00000008732	ENSAPLP00000031434	DNA polymerase gamma 2, accessory subunit.	Transcription factor A, mitochondrial.	0.611
POLR1B	DIMT1	ENSAPLP00000003667	ENSAPLP00000009202	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.620
POLR1B	POLRMT	ENSAPLP00000003667	ENSAPLP00000002536	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.820
POLR1B	TFAM	ENSAPLP00000003667	ENSAPLP00000031434	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription factor A, mitochondrial.	0.426
POLR2B	POLRMT	ENSAPLP00000020855	ENSAPLP00000002536	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.671

page 1 of 3

Server load: low (30%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About