Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TVP23AGolgi apparatus membrane protein TVP23 homolog. (234 aa)    
Predicted Functional Partners:
COP1
COP1 E3 ubiquitin ligase.
      
 0.700
EPHX4
Epoxide hydrolase 4.
      
 0.678
MAN2C1
Mannosidase alpha class 2C member 1.
      
 0.644
GSC
Goosecoid homeobox.
      
 0.637
NEXMIF
Neurite extension and migration factor.
      
 0.627
YIPF3
Yip1 domain family member 3.
   
 
 0.624
TMEM175
Transmembrane protein 175.
      
 0.617
CACNA1I
Calcium voltage-gated channel subunit alpha1 I.
      
 0.610
MAGI1
Membrane associated guanylate kinase, WW and PDZ domain containing 1.
      
 0.594
SNCAIP
Synuclein alpha interacting protein.
      
 0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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