Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC34Coiled-coil domain containing 34. (302 aa)    
Predicted Functional Partners:
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 
 0.681
U3J8R3_ANAPP
Uncharacterized protein.
      
 0.658
NEMP1
Nuclear envelope integral membrane protein 1.
   
  
 0.644
ENSAPLP00000021462
Uncharacterized protein.
    
 0.621
CCDC77
Coiled-coil domain containing 77.
   
  
 0.620
ZMAT5
Zinc finger matrin-type 5.
    
 
 0.619
RBM34
RNA binding motif protein 34.
   
 0.600
RIBC2
RIB43A domain with coiled-coils 2.
   
 0.563
DEPDC1B
DEP domain containing 1B.
   
  
 0.558
BDNF
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
      
 0.557
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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