Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCG3Secretogranin III. (479 aa)    
Predicted Functional Partners:
SCG5
Secretogranin V.
   
  
 0.762
SCG2
Secretogranin II.
   
 
 0.760
CHGB
Chromogranin B.
   
  
 0.746
FAM20C
FAM20C golgi associated secretory pathway kinase.
    
  0.578
ENSAPLP00000028354
Uncharacterized protein.
    
  0.578
CPE
Carboxypeptidase E.
   
  
 0.570
PTPRN2
Uncharacterized protein.
   
  
 0.558
PMCH
Pro-melanin concentrating hormone.
      
 0.544
DISP2
Dispatched RND transporter family member 2.
   
  
 0.512
DYNC1H1
Dynein cytoplasmic 1 heavy chain 1.
    
   0.504
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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