STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT12Synaptotagmin 12. (422 aa)    
Predicted Functional Partners:
ITSN2
Uncharacterized protein.
     
 0.620
ZDHHC13
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.613
NADSYN1
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
      
 0.611
APIP
Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Functions in the methionine salvage pathway. May play a role in apoptosis.
      
 0.611
IGHMBP2
Immunoglobulin mu DNA binding protein 2.
      
 0.611
TMEM9
Transmembrane protein 9.
      
 0.611
ENSAPLP00000028515
Uncharacterized protein.
     
 0.597
RIC8A
RIC8 guanine nucleotide exchange factor A.
      
 0.586
ENSAPLP00000020757
Uncharacterized protein.
     
 0.572
ENSAPLP00000024521
EH domain-containing protein.
     
 0.572
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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