STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD4Programmed cell death 4. (467 aa)    
Predicted Functional Partners:
PTEN
Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.
      
 0.692
U3IDF0_ANAPP
Q_MOTIF domain-containing protein.
   
 0.676
EIF4A2
Eukaryotic translation initiation factor 4A2; Belongs to the DEAD box helicase family.
   
 0.676
PDCD6
Programmed cell death 6.
     
 0.617
PDCD1
Ig-like domain-containing protein.
      
 0.610
ENSAPLP00000019327
Uncharacterized protein.
      
 0.610
ENSAPLP00000016573
RRM domain-containing protein.
   
  
 0.541
RECK
Reversion inducing cysteine rich protein with kazal motifs.
      
 0.483
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 
 0.465
DICER1
Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily.
      
 0.451
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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