STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
U3I602_ANAPPC-type lectin domain-containing protein. (229 aa)    
Predicted Functional Partners:
ENSAPLP00000018064
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.871
PRDM2
PR/SET domain 2.
    
 0.660
SYK
Spleen associated tyrosine kinase.
    
 0.653
OIT3
Oncoprotein induced transcript 3.
    
 0.582
FIBCD1
Fibrinogen C domain containing 1.
   
 0.534
PTPN6
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
  0.460
GPLD1
Glycosylphosphatidylinositol specific phospholipase D1.
     
 0.454
ZAP70
Tyrosine-protein kinase.
    
 0.453
F2RL2
Coagulation factor II thrombin receptor like 2.
    
 0.453
TNN
Tenascin N.
    
 0.448
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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