STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX8SRY-box transcription factor 8. (459 aa)    
Predicted Functional Partners:
SOX30
SRY-box transcription factor 30.
      
0.663
PAX3
Paired box 3.
   
 
 0.647
QSOX1
Sulfhydryl oxidase.
    
 
 0.627
ZIC1
Zic family member 1.
    
 0.623
ETS1
ETS proto-oncogene 1, transcription factor.
    
 
 0.613
FOXE1
Forkhead box E1.
    
 0.592
SNAI2
Uncharacterized protein.
   
 
 0.589
NR5A1
Nuclear receptor subfamily 5 group A member 1.
    
 0.577
CTNNB1
Catenin beta 1.
    
 0.558
WT1
WT1 transcription factor.
    
 0.546
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.