STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CWC15CWC15 spliceosome associated protein homolog. (230 aa)    
Predicted Functional Partners:
PLRG1
Pleiotropic regulator 1.
   
 0.997
CDC5L
Cell division cycle 5 like.
   
 0.997
PRPF19
Pre-mRNA processing factor 19.
    
 0.994
BCAS2
BCAS2 pre-mRNA processing factor.
   
 0.991
CTNNBL1
Catenin beta like 1.
    
 0.990
BUD31
BUD31 homolog.
   
 0.986
SNW1
SNW domain containing 1.
   
 0.986
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
 0.982
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
 0.980
PRPF8
Pre-mRNA processing factor 8.
    
 0.979
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.