STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR42E2Short chain dehydrogenase/reductase family 42E, member 2. (281 aa)    
Predicted Functional Partners:
TADA2B
Transcriptional adapter.
      
 0.705
NDUFAF2
NADH:ubiquinone oxidoreductase complex assembly factor 2.
      
 0.664
LMOD3
Leiomodin 3.
      
 0.636
F2RL2
Coagulation factor II thrombin receptor like 2.
      
 0.624
UNC45B
Unc-45 myosin chaperone B.
      
 0.611
CACNG1
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
      
 0.611
MCMDC2
Minichromosome maintenance domain containing 2.
      
 0.603
B3GNT9
Hexosyltransferase.
      
 0.602
CACNA1H
Calcium voltage-gated channel subunit alpha1 H.
      
 0.586
CRAMP1
Cramped chromatin regulator homolog 1.
      
 0.434
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.