Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LYARLy1 antibody reactive. (395 aa)    
Predicted Functional Partners:
RRP1B
Ribosomal RNA processing 1B.
   
 
 0.920
RPF2
Ribosome production factor 2 homolog.
   
   0.915
ENSAPLP00000022103
Brix domain-containing protein.
   
   0.898
PINX1
PIN2 (TERF1) interacting telomerase inhibitor 1.
   
   0.864
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.858
DDX18
RNA helicase.
   
   0.841
MAK16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
   0.829
MRTO4
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
   0.821
NIP7
Nucleolar pre-rRNA processing protein NIP7.
   
  
 0.804
ENSAPLP00000030905
Brix domain-containing protein.
   
   0.804
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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