STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U3I670_ANAPPRRM domain-containing protein. (560 aa)    
Predicted Functional Partners:
HMGA2
Uncharacterized protein.
   
 
 0.736
YTHDC1
YTH domain containing 1.
      
 0.625
YTHDF1
YTH N6-methyladenosine RNA binding protein 1.
    
 
 0.614
BAIAP2L1
BAI1 associated protein 2 like 1.
      
 0.603
DDX55
RNA helicase.
    
 
 0.558
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
    
 
 0.553
TDRP
Testis development related protein.
      
 0.539
METTL14
Methyltransferase like 14; Belongs to the MT-A70-like family.
      
 0.482
KIF18A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.473
LIN28B
Lin-28 homolog B.
   
 
 0.464
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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