U3I692_ANAPP protein (Anas platyrhynchos) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

U3I692_ANAPP

Uncharacterized protein. (127 aa)

Predicted Functional Partners:

WASHC2C

0.900

WASHC3

0.766

WASHC5

0.704

VPS35

0.679

WASHC4

0.638

U3HYG9_ANAPP

0.619

WASHC1

0.601

ENSAPLP00000019560

0.601

CRISP2

0.592

SLF1

0.546

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRISP2	U3I692_ANAPP	ENSAPLP00000020197	ENSAPLP00000002763	Cysteine rich secretory protein 2; Belongs to the CRISP family.	Uncharacterized protein.	0.592
CRISP2	WASHC2C	ENSAPLP00000020197	ENSAPLP00000029855	Cysteine rich secretory protein 2; Belongs to the CRISP family.	CAP-ZIP_m domain-containing protein.	0.592
ENSAPLP00000019560	U3I692_ANAPP	ENSAPLP00000019560	ENSAPLP00000002763	WH2 domain-containing protein.	Uncharacterized protein.	0.601
ENSAPLP00000019560	VPS35	ENSAPLP00000019560	ENSAPLP00000021755	WH2 domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.565
ENSAPLP00000019560	WASHC1	ENSAPLP00000019560	ENSAPLP00000018929	WH2 domain-containing protein.	WASH_WAHD domain-containing protein.	0.933
ENSAPLP00000019560	WASHC2C	ENSAPLP00000019560	ENSAPLP00000029855	WH2 domain-containing protein.	CAP-ZIP_m domain-containing protein.	0.601
ENSAPLP00000019560	WASHC3	ENSAPLP00000019560	ENSAPLP00000031123	WH2 domain-containing protein.	WASH complex subunit 3.	0.885
ENSAPLP00000019560	WASHC4	ENSAPLP00000019560	ENSAPLP00000014885	WH2 domain-containing protein.	WASH complex subunit 4.	0.781
ENSAPLP00000019560	WASHC5	ENSAPLP00000019560	ENSAPLP00000014036	WH2 domain-containing protein.	WASH complex subunit 5.	0.833
SLF1	U3I692_ANAPP	ENSAPLP00000029800	ENSAPLP00000002763	SMC5-SMC6 complex localization factor 1.	Uncharacterized protein.	0.546
SLF1	WASHC2C	ENSAPLP00000029800	ENSAPLP00000029855	SMC5-SMC6 complex localization factor 1.	CAP-ZIP_m domain-containing protein.	0.546
U3HYG9_ANAPP	U3I692_ANAPP	ENSAPLP00000000039	ENSAPLP00000002763	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.619
U3HYG9_ANAPP	WASHC2C	ENSAPLP00000000039	ENSAPLP00000029855	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	CAP-ZIP_m domain-containing protein.	0.619
U3I692_ANAPP	CRISP2	ENSAPLP00000002763	ENSAPLP00000020197	Uncharacterized protein.	Cysteine rich secretory protein 2; Belongs to the CRISP family.	0.592
U3I692_ANAPP	ENSAPLP00000019560	ENSAPLP00000002763	ENSAPLP00000019560	Uncharacterized protein.	WH2 domain-containing protein.	0.601
U3I692_ANAPP	SLF1	ENSAPLP00000002763	ENSAPLP00000029800	Uncharacterized protein.	SMC5-SMC6 complex localization factor 1.	0.546
U3I692_ANAPP	U3HYG9_ANAPP	ENSAPLP00000002763	ENSAPLP00000000039	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.619
U3I692_ANAPP	VPS35	ENSAPLP00000002763	ENSAPLP00000021755	Uncharacterized protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.679
U3I692_ANAPP	WASHC1	ENSAPLP00000002763	ENSAPLP00000018929	Uncharacterized protein.	WASH_WAHD domain-containing protein.	0.601
U3I692_ANAPP	WASHC2C	ENSAPLP00000002763	ENSAPLP00000029855	Uncharacterized protein.	CAP-ZIP_m domain-containing protein.	0.900