Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GOLGA3Golgin A3. (1514 aa)    
Predicted Functional Partners:
TRAPPC8
Trafficking protein particle complex 8.
   
 
 0.772
DPP7
Dipeptidyl peptidase 7.
      
 0.769
TMED10
Transmembrane p24 trafficking protein 10.
     
 0.739
TSNAX
Uncharacterized protein.
    
 
 0.726
COG3
Component of oligomeric golgi complex 3.
    
 0.721
IST1
IST1 factor associated with ESCRT-III.
    
 
 0.720
PICK1
Protein interacting with PRKCA 1.
      
 0.686
MEA1
Male-enhanced antigen 1.
      
 0.669
RND2
Rho family GTPase 2.
    
 0.658
SPATA16
Spermatogenesis associated 16.
      
 0.634
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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