STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOLGA3Golgin A3. (1514 aa)    
Predicted Functional Partners:
TRAPPC8
Trafficking protein particle complex 8.
   
 
 0.838
ENSAPLP00000025114
Uncharacterized protein.
      
 0.819
COG3
Component of oligomeric golgi complex 3.
    
 0.767
RNPC3
RNA binding region (RNP1, RRM) containing 3.
   
  
 0.751
TMEM63C
Transmembrane protein 63C.
    
 
 0.747
IST1
IST1 factor associated with ESCRT-III.
      
 0.726
TMED10
Transmembrane p24 trafficking protein 10.
      
 0.714
ZNF367
Zinc finger protein 367.
    
 0.696
COMMD10
COMM domain containing 10.
      
 0.673
RIPOR1
RHO family interacting cell polarization regulator 1.
    
 0.618
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.