STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNTNSentan, cilia apical structure protein. (179 aa)    
Predicted Functional Partners:
VSTM2A
V-set and transmembrane domain containing 2A.
      
 0.650
SIX2
SIX homeobox 2.
   
  
 0.640
CFAP58
Cilia and flagella associated protein 58.
      
 0.636
CHST13
Carbohydrate sulfotransferase.
      
 0.611
SHISA8
Uncharacterized protein.
      
 0.514
CCDC65
Coiled-coil domain containing 65.
      
 0.497
CILP2
Cartilage intermediate layer protein 2.
      
 0.477
UNC45B
Unc-45 myosin chaperone B.
      
 0.451
DNAI1
Dynein axonemal intermediate chain 1.
      
 0.432
TSPAN1
Tetraspanin.
      
 0.430
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.