STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRAT1BRCA1 associated ATM activator 1. (705 aa)    
Predicted Functional Partners:
CARD19
Uncharacterized protein.
      
 0.634
EPN3
Epsin 3.
      
 0.624
C12orf29
Chromosome 12 open reading frame 29.
      
 0.611
BBX
BBX high mobility group box domain containing.
      
 0.586
BRCA1
BRCA1 DNA repair associated.
    
 
 0.576
TMEM120B
Transmembrane protein 120B.
      
 0.562
SCUBE3
Signal peptide, CUB domain and EGF like domain containing 3.
      
 0.524
E4F1
E4F transcription factor 1.
   
    0.487
BRAP
BRCA1 associated protein.
      
 0.454
TRIM59
Uncharacterized protein.
      
 0.432
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.