STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSG1LBEN domain-containing protein. (548 aa)    
Predicted Functional Partners:
CNIH3
Cornichon family AMPA receptor auxiliary protein 3.
      
 0.749
CNIH1
Cornichon family AMPA receptor auxiliary protein 1.
      
 0.705
COPS7A
COP9 signalosome subunit 7A.
      
 0.630
MED27
Mediator complex subunit 27.
      
 0.621
CCDC6
Coiled-coil domain containing 6.
      
 0.620
SLC25A25
Solute carrier family 25 member 25; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.620
SYT17
Synaptotagmin 17.
      
 0.611
MTA3
Metastasis associated 1 family member 3.
      
 0.592
GMPR
GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides.
      
 0.586
BCL7A
BAF chromatin remodeling complex subunit BCL7A.
      
 0.552
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.