Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRFSerum response factor. (516 aa)    
Predicted Functional Partners:
MYOCD
Myocardin.
    
 0.992
ELK4
ETS transcription factor ELK4.
    
 0.987
MRTFA
Myocardin related transcription factor A.
    
 0.917
MRTFB
Myocardin related transcription factor B.
    
 0.917
FOS
Fos proto-oncogene, AP-1 transcription factor subunit.
    
 0.791
CEBPB
CCAAT/enhancer-binding protein.
    
 
 0.735
ELK3
ETS transcription factor ELK3.
    
 0.719
GATA3
GATA binding protein 3.
    
 
 0.684
CREB1
cAMP responsive element binding protein 1.
    
 0.677
FOXG1
Forkhead box G1.
    
 
 0.673
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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