STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCDH15Protocadherin related 15. (1836 aa)    
Predicted Functional Partners:
USH1C
USH1 protein network component harmonin.
   
 
 0.849
CDH23
Cadherin related 23.
   
 0.833
CDHR2
Cadherin related family member 2.
   
 0.833
LHFPL5
LHFPL tetraspan subfamily member 5.
    
 0.829
MYO7A
Myosin VIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.779
USH1G
USH1 protein network component sans.
   
 0.744
TMC2
Uncharacterized protein.
    
 0.715
USH2A
Usherin.
   
 
 0.709
ENSAPLP00000020316
Uncharacterized protein.
    
 0.665
WHRN
Whirlin.
    
 
 0.660
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.