STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN10Calpain 10; Belongs to the peptidase C2 family. (686 aa)    
Predicted Functional Partners:
CAPNS2
Calpain small subunit 2.
 
 
 0.726
ENSAPLP00000032537
Uncharacterized protein.
    
 0.668
RNPEPL1
Arginyl aminopeptidase like 1.
      
 0.635
U3I3N3_ANAPP
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
  
 0.588
PAFAH2
Platelet-activating factor acetylhydrolase.
   
  
 0.560
ENSAPLP00000020757
Uncharacterized protein.
   
 
  0.534
ENSAPLP00000024521
EH domain-containing protein.
   
 
  0.534
ENSAPLP00000028453
annotation not available
   
 
  0.534
ENSAPLP00000028515
Uncharacterized protein.
   
 
  0.534
ITSN2
Uncharacterized protein.
   
 
  0.534
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.