Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNFAIP1TNF alpha induced protein 1. (314 aa)    
Predicted Functional Partners:
KCTD10
Potassium channel tetramerization domain containing 10.
   
   0.961
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.959
UBXN7
UBX domain-containing protein 7.
    
 
 0.949
FAF1
Fas associated factor 1.
    
 
 0.947
RND2
Rho family GTPase 2.
    
 0.798
DNAJB5
DnaJ heat shock protein family (Hsp40) member B5.
    
   0.742
RND3
Rho family GTPase 3.
    
 0.684
ARIH1
RBR-type E3 ubiquitin transferase.
    
 
 0.670
USP28
Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family.
    
 
 0.615
USP25
Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family.
    
 
 0.615
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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