STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS20ADAM metallopeptidase with thrombospondin type 1 motif 20. (1912 aa)    
Predicted Functional Partners:
FBLN1
Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.
    
 0.643
VPS33A
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.586
ARHGAP19
Rho-GAP domain-containing protein.
      
 0.586
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
      
 0.532
ACAN
Aggrecan.
     
 0.522
SPECC1L
Calponin-homology (CH) domain-containing protein.
   
  
 0.483
TSR3
Probable ribosome biogenesis protein TSR3; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.477
ATRN
Attractin.
      
 0.451
MSANTD1
Myb/SANT DNA binding domain containing 1.
      
 0.435
POFUT2
Protein O-fucosyltransferase 2.
     
 0.428
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.