STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB1CC1RB1 inducible coiled-coil 1. (1348 aa)    
Predicted Functional Partners:
ATG13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
    
 0.992
ULK2
Unc-51 like autophagy activating kinase 2.
    
 0.988
ATG16L1
WD_REPEATS_REGION domain-containing protein.
   
 0.980
ULK1
Unc-51 like autophagy activating kinase 1.
    
 0.967
ATG101
Uncharacterized protein.
    
 0.948
ATG14
Autophagy related 14.
   
 0.947
C9orf72
C9orf72-SMCR8 complex subunit.
    
 0.931
ENSAPLP00000027533
Uncharacterized protein.
 
     0.930
BECN1
Uncharacterized protein.
    
 0.918
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.860
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.