STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDLIM1PDZ and LIM domain 1. (327 aa)    
Predicted Functional Partners:
SH3RF3
SH3 domain containing ring finger 3.
    
 0.563
ACTN1
Actinin alpha 1.
   
 
 0.504
ACTN4
Actinin alpha 4.
   
 
 0.504
BLOC1S2
Biogenesis of lysosomal organelles complex 1 subunit 2.
   
  
 0.491
PARVG
Parvin gamma.
   
 0.482
PARVA
Parvin alpha.
   
 0.482
PARVB
Uncharacterized protein.
   
 0.482
FBLIM1
LIM zinc-binding domain-containing protein.
   
 
 0.481
GTF2A2
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
      
 0.479
VCL
Vinculin.
   
 0.476
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.