STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCBSarcoglycan beta. (322 aa)    
Predicted Functional Partners:
LRRC66
Ig-like domain-containing protein.
 
      0.734
ZC3H18
Zinc finger CCCH-type containing 18.
      
 0.636
LRSAM1
Leucine rich repeat and sterile alpha motif containing 1.
      
 0.621
FRYL
FRY like transcription coactivator.
      
 0.611
SLAIN2
SLAIN motif family member 2.
      
 0.611
TMEM132D
Uncharacterized protein.
      
 0.611
LEMD2
LEM domain containing 2.
      
 0.602
ENSAPLP00000022844
Cyclic nucleotide-binding domain-containing protein.
      
 0.481
PNPLA7
Patatin like phospholipase domain containing 7.
      
 0.481
OSCP1
Organic solute carrier partner 1.
      
 0.436
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.