Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SGCBSarcoglycan beta. (322 aa)    
Predicted Functional Partners:
SGCG
Sarcoglycan gamma.
    
 0.925
DAG1
Dystroglycan 1.
    
 0.924
SGCZ
Sarcoglycan zeta.
    
 0.879
ENSAPLP00000019534
Uncharacterized protein.
    
 0.879
SGCD
Sarcoglycan delta.
    
 0.879
SSPN
Sarcospan.
    
  0.832
ENSAPLP00000017950
Uncharacterized protein.
     
 0.793
SGCE
Sarcoglycan epsilon.
     
 0.793
LRRC66
Ig-like domain-containing protein.
 
      0.734
SNTG2
Syntrophin gamma 2.
     
  0.714
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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