STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LNX1Ligand of numb-protein X 1. (779 aa)    
Predicted Functional Partners:
NUMB
NUMB endocytic adaptor protein.
   
 
 0.719
RPS27A
Ubiquitin-like domain-containing protein.
    
  0.709
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
    
 0.665
SCFD2
Sec1 family domain containing 2; Belongs to the STXBP/unc-18/SEC1 family.
      
 0.549
U3J5I9_ANAPP
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.545
EXOC1L
Exocyst complex component 1 like.
    
 
 0.545
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.539
ENSAPLP00000023897
Uncharacterized protein.
    
  0.536
MPP5
Membrane palmitoylated protein 5; Belongs to the MAGUK family.
   
 0.526
MPP3
Membrane palmitoylated protein 3; Belongs to the MAGUK family.
   
 0.526
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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