STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHIC1Cysteine rich hydrophobic domain 1. (187 aa)    
Predicted Functional Partners:
RLIM
Ring finger protein, LIM domain interacting.
      
 0.748
C3orf14
Chromosome 3 open reading frame 14.
      
 0.636
OTULINL
OTU deubiquitinase with linear linkage specificity like.
      
 0.636
TTC1
Tetratricopeptide repeat domain 1.
      
 0.625
NEXMIF
Neurite extension and migration factor.
      
 0.621
ARHGEF9
Cdc42 guanine nucleotide exchange factor 9.
   
  
 0.613
MRPL50
Mitochondrial ribosomal protein L50.
      
 0.611
GNL3
G protein nucleolar 3.
      
 0.611
SLC16A2
Solute carrier family 16 member 2.
      
 0.611
RTN4IP1
Reticulon 4 interacting protein 1.
      
 0.611
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.