STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM39RNA binding motif protein 39. (522 aa)    
Predicted Functional Partners:
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
   
 0.841
CDC5L
Cell division cycle 5 like.
   
 
 0.815
SRRM1
Serine and arginine repetitive matrix 1.
   
 0.811
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 0.744
RBM25
RNA binding motif protein 25.
   
0.743
BANF1
Barrier to autointegration factor 1.
   
 0.733
PRPF40A
Pre-mRNA processing factor 40 homolog A.
   
  0.688
U3IMW5_ANAPP
Uncharacterized protein.
   
  0.685
SON
Uncharacterized protein.
   
  0.685
ENSAPLP00000025359
PWI domain-containing protein.
   
 0.685
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.