Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC19A1Solute carrier family 19 member 1. (722 aa)    
Predicted Functional Partners:
GGH
Folate gamma-glutamyl hydrolase.
      
 0.851
TPMT
Thiopurine S-methyltransferase.
      
 0.738
SLC46A1
Solute carrier family 46 member 1.
      
 0.670
HMGCLL1
3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1.
      
 0.669
ENSAPLP00000016392
Uncharacterized protein.
    
   0.638
MTRR
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
      
 0.624
SLC25A19
Solute carrier family 25 member 19; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.611
MTHFR
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
      
 0.584
SLC25A26
Solute carrier family 25 member 26; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.560
MSH4
MutS homolog 4.
      
 0.548
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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