STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGBL1Integrin subunit beta like 1. (495 aa)    
Predicted Functional Partners:
MAIP1
Matrix AAA peptidase interacting protein 1.
      
 0.747
ITGA8
Integrin subunit alpha 8; Belongs to the integrin alpha chain family.
   
 0.698
TNS3
Tensin 3.
   
 0.694
TNS1
Tensin 1.
   
 0.694
MAP7
Microtubule associated protein 7.
     
 0.691
ITGAE
Integrin subunit alpha E; Belongs to the integrin alpha chain family.
   
 0.682
ITGA11
Integrin subunit alpha 11; Belongs to the integrin alpha chain family.
   
 0.675
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
   
 0.654
ITGA3
Uncharacterized protein.
   
 0.651
MRPL1
Mitochondrial ribosomal protein L1.
      
 0.609
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.