STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2AZ1Histone H2A; Belongs to the histone H2A family. (144 aa)    
Predicted Functional Partners:
ENSAPLP00000028245
Uncharacterized protein.
   
 0.953
AIFM1
Apoptosis inducing factor mitochondria associated 1.
     
  0.900
VPS72
Vacuolar protein sorting 72 homolog.
    
 
 0.886
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.882
ARID4B
AT-rich interaction domain 4B.
   
 0.857
ARID4A
AT-rich interaction domain 4A.
   
 0.857
TMEM177
Transmembrane protein 177.
    
 
 0.834
ACTR6
Actin related protein 6; Belongs to the actin family.
   
 
 0.814
U3I833_ANAPP
Histone H3; Belongs to the histone H3 family.
 
 
 0.808
ENSAPLP00000026892
annotation not available
 
 
 0.808
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.