Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TDRD7Tudor domain containing 7. (1097 aa)    
Predicted Functional Partners:
PIMREG
Uncharacterized protein.
    
 
 0.839
TDRD9
Tudor domain containing 9.
   
 0.824
PIWIL2
Piwi like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 0.756
CDK17
Cyclin dependent kinase 17.
    
 
 0.729
NANOS1
Nanos C2HC-type zinc finger 1; Belongs to the nanos family.
   
  
 0.723
PIWIL1
Piwi like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 0.708
DND1
DND microRNA-mediated repression inhibitor 1.
   
 
 0.707
CCDC180
Uncharacterized protein.
      
 0.670
MARF1
Meiosis regulator and mRNA stability factor 1.
      
 0.669
XPA
XPA, DNA damage recognition and repair factor.
      
 0.666
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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