STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SORBS1Sorbin and SH3 domain containing 1. (509 aa)    
Predicted Functional Partners:
ENSAPLP00000017917
SoHo domain-containing protein.
 
      0.890
VCL
Vinculin.
   
 0.861
VTA1
Vesicle trafficking 1.
    
 
 0.622
GCH1
GTP cyclohydrolase 1.
    
   0.621
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
     
 0.619
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
     
 0.564
CBLB
Cbl proto-oncogene B.
    
 
 0.542
CBL
Cbl proto-oncogene.
    
 
 0.542
DLG5
Discs large MAGUK scaffold protein 5; Belongs to the MAGUK family.
    
 0.526
FGF17
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.483
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.