STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEP104Centrosomal protein 104. (947 aa)    
Predicted Functional Partners:
CEP128
Centrosomal protein 128.
      
 0.857
ENKD1
Enkurin domain containing 1.
      
 0.737
CEP290
Centrosomal protein 290.
      
 0.668
MPHOSPH9
M-phase phosphoprotein 9.
      
 0.668
CEP97
Centrosomal protein 97.
      
 0.665
LRRC47
Leucine rich repeat containing 47.
 
 
  
 0.664
ARL13B
ADP ribosylation factor like GTPase 13B.
      
 0.653
TTLL6
Uncharacterized protein.
      
 0.646
CEP164
Centrosomal protein 164.
      
 0.646
CEP78
Centrosomal protein 78.
      
 0.641
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.