STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC2Zinc finger CCHC-type containing 2. (1207 aa)    
Predicted Functional Partners:
RELCH
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
    
 
 0.751
RFT1
Protein RFT1 homolog; May be involved in N-linked oligosaccharide assembly. Belongs to the RFT1 family.
      
 0.602
PHLPP1
PH domain and leucine rich repeat protein phosphatase 1.
   
  
 0.588
TLL1
Metalloendopeptidase.
      
 0.539
MORC3
MORC family CW-type zinc finger 3.
   
  
 0.487
PLEKHM3
Pleckstrin homology domain containing M3.
      
 0.482
USP18
USP domain-containing protein; Belongs to the peptidase C19 family.
   
  
 0.482
FMR1
Fragile X mental retardation 1.
      
 0.456
FAM117B
Family with sequence similarity 117 member B.
      
 0.453
MTREX
Mtr4 exosome RNA helicase.
   
 
 0.449
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.