Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RABEPKRab9 effector protein with kelch motifs. (369 aa)    
Predicted Functional Partners:
VAMP3
Vesicle associated membrane protein 3.
     
 0.957
ALDH6A1
Aldehyde dehydrogenase 6 family member A1.
      
 0.696
CACFD1
Calcium channel flower domain containing 1.
      
 0.667
STX8
Syntaxin 8.
     
 0.667
MMAA
Metabolism of cobalamin associated A.
      
 0.666
LRRC8C
Leucine rich repeat containing 8 VRAC subunit C.
      
 0.665
KIF17
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.662
RAB9A
RAB9A, member RAS oncogene family.
    
 0.603
RAB9B
RAB9B, member RAS oncogene family.
    
 0.590
ASCC2
Activating signal cointegrator 1 complex subunit 2.
      
 0.589
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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