STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
U3I776_ANAPPUncharacterized protein. (197 aa)    
Predicted Functional Partners:
SET
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.806
ANP32E
Acidic nuclear phosphoprotein 32 family member E.
   
   0.757
VPS72
Vacuolar protein sorting 72 homolog.
    
 
 0.742
KPNA1
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.708
ENSAPLP00000019970
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.676
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 
 0.628
XPO1
CRM1_C domain-containing protein.
   
 0.604
ENSAPLP00000018398
Importin N-terminal domain-containing protein.
   
 0.604
INO80
INO80 complex ATPase subunit.
    
 
 0.577
NUP214
Nucleoporin 214.
     
 0.564
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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