Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TMEM192Transmembrane protein 192. (250 aa)    
Predicted Functional Partners:
LAMP2
Lysosomal associated membrane protein 2.
    
 0.944
LAMP1
Lysosomal associated membrane protein 1.
    
 0.843
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
   
 0.773
RAB7A
RAB7A, member RAS oncogene family.
    
 0.660
RTRAF
RNA transcription, translation and transport factor.
      
 0.601
GRAMD1C
GRAM domain containing 1C.
   
 0.584
NSG2
Neuronal vesicle trafficking associated 2.
      
 0.580
KLHL2
Kelch like family member 2.
    
 0.577
U3I5S1_ANAPP
BPI1 domain-containing protein.
     
 0.576
TMEM167A
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
      
 0.575
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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