Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNHIT6Zinc finger HIT-type containing 6. (284 aa)    
Predicted Functional Partners:
NOP58
NOP58 ribonucleoprotein.
   
 0.943
ZNHIT3
Zinc finger HIT-type containing 3.
    
 
 0.881
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 
 0.806
NUFIP1
Nuclear FMR1 interacting protein 1.
   
 0.798
SNU13
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 
 0.767
ZC3H7A
Zinc finger CCCH-type containing 7A.
   
 
 0.659
RPP38
Ribonuclease P/MRP subunit p38.
   
 
 0.614
PIH1D2
PIH1_CS domain-containing protein.
    
 
 0.614
NOL8
Nucleolar protein 8.
   
  
 0.608
BCCIP
Protein BCCIP homolog; Belongs to the BCP1 family.
   
  
 0.600
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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