STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMF1Lipase maturation factor; Involved in the maturation of specific proteins in the endoplasmic reticulum; Belongs to the lipase maturation factor family. (345 aa)    
Predicted Functional Partners:
LIPC
Lipase C, hepatic type.
    
 0.924
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
      
 0.847
SPON2
Spondin 2.
   
  
 0.824
FAM163B
Family with sequence similarity 163 member B.
      
 0.814
SLC38A10
Solute carrier family 38 member 10.
      
 0.804
GNL2
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
      
 0.775
CHCHD7
Coiled-coil-helix-coiled-coil-helix domain containing 7.
      
 0.768
NETO1
Neuropilin and tolloid like 1.
      
 0.747
KHDC4
KH domain containing 4, pre-mRNA splicing factor.
      
 0.736
MYADML2
Myeloid associated differentiation marker like 2.
    
 
 0.669
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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