STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFPQUncharacterized protein. (650 aa)    
Predicted Functional Partners:
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.693
ENSAPLP00000019316
Uncharacterized protein.
   
 
 0.680
ZRANB2
Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection. Belongs to the ZRANB2 family.
   
 
 0.612
SIN3A
SIN3 transcription regulator family member A.
    
 
 0.587
TARDBP
TAR DNA binding protein.
   
 
 0.557
ENSAPLP00000030247
Uncharacterized protein.
   
 
 0.546
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
   
  
 0.519
SRSF1
Uncharacterized protein.
   
 
 0.511
POLR2J
RNA polymerase II subunit J.
      
 0.479
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.469
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.