Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GOLGA1Golgin A1. (658 aa)    
Predicted Functional Partners:
EXTL3
Exostosin like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family.
      
 0.544
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.542
TMF1
TATA element modulatory factor 1.
     
 0.494
ENSAPLP00000031300
Uncharacterized protein.
    
 0.427
RAB41
RAB41, member RAS oncogene family.
    
 0.409
RAB6A
RAB6A, member RAS oncogene family.
    
 0.409
PSPH
Phosphoserine phosphatase.
      
 0.406
AP4B1
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
 
 0.404
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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