STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOLGA1Golgin A1. (658 aa)    
Predicted Functional Partners:
AP4B1
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
 
 0.611
PIRT
Phosphoinositide interacting regulator of transient receptor potential channels.
      
 0.611
RC3H2
Ring finger and CCCH-type domains 2.
      
 0.603
ENSAPLP00000031300
Uncharacterized protein.
    
 0.591
PITPNB
Phosphatidylinositol transfer protein beta.
      
 0.586
MAPK8IP1
Mitogen-activated protein kinase 8 interacting protein 1.
      
 0.586
RABGAP1
RAB GTPase activating protein 1.
    
 
 0.558
PITPNA
Phosphatidylinositol transfer protein alpha.
      
 0.555
RABGAP1L
RAB GTPase activating protein 1 like.
    
 
 0.483
AP4E1
Adaptor related protein complex 4 subunit epsilon 1.
    
 
 0.483
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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