STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTBK1Tau tubulin kinase 1. (1348 aa)    
Predicted Functional Partners:
NUDCD2
NudC domain containing 2.
    
 
 0.673
CEP164
Centrosomal protein 164.
    
 0.669
LTV1
Uncharacterized protein.
    
 0.626
BYSL
Bystin like.
    
 0.614
TSR1
TSR1 ribosome maturation factor.
    
 0.612
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 0.585
C20orf194
Chromosome 20 open reading frame 194.
      
 0.571
RPS3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
 0.558
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.558
GABARAPL2
GABA type A receptor associated protein like 2.
    
 
 0.546
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.